BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009G05LP1|AL426090
(864 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1743 1675 0.0
>3x_Contig1743
Length = 20172
Score = 1675 bits (843), Expect = 0.0
Identities = 859/865 (99%), Gaps = 1/865 (0%)
Strand = Plus / Plus
Query: 1 gaatcagagtgggctctggaataccgcattatatacgatttttgcgccattcggc-ccag 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 7519 gaatcagagtgggctctggaataccgcattatatacgatttttgcgccattcggcgccag 7578
Query: 60 ttagcggtaatcacctttcaatgattccctttgcactgaactccttgtggtcacgtcctc 119
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7579 tcagcggtaatcacctttcaatgattccctttgcactgaactccttgtggtcacgtcctc 7638
Query: 120 cgactcggtccgaagatgccgtctacgcccttggtccggtcctaggtaatggtgttaggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7639 cgactcggtccgaagatgccgtctacgcccttggtccggtcctaggtaatggtgttaggc 7698
Query: 180 cggccccgaccttctcctccaacgaagcgcgaaggaaaacagaaaaaaaaaactcacgca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7699 cggccccgaccttctcctccaacgaagcgcgaaggaaaacagaaaaaaaaaactcacgca 7758
Query: 240 cacgtgatacaagtcacgtgtacagtaatcatttatgacacctaattatctgaaactgcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7759 cacgtgatacaagtcacgtgtacagtaatcatttatgacacctaattatctgaaactgcc 7818
Query: 300 atgttttggtcgatgtaaaagatactctcaaaaaggcgcataaactatttagacgctaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7819 atgttttggtcgatgtaaaagatactctcaaaaaggcgcataaactatttagacgctaag 7878
Query: 360 atggtccgattttttacctgaaaaccgtcgatgtcgacagaatgtaattgaagcgatatg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7879 atggtccgattttttacctgaaaaccgtcgatgtcgacagaatgtaattgaagcgatatg 7938
Query: 420 gcttgtatttaactatgtacatctgccatatacctttacaaacccctcatgattagccgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7939 gcttgtatttaactatgtacatctgccatatacctttacaaacccctcatgattagccgt 7998
Query: 480 taaccgaaatgtatgtatctttccaacctctacttctgcacactgggacatcccataagt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7999 taaccgaaatgtatgtatctttccaacctctacttctgcacactgggacatcccataagt 8058
Query: 540 ccagtcacgtgaattaagaaaatgaatataccactagttattccttgtagaacgcagatc 599
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8059 ccagtcacgtgaatgaagaaaatgaatataccactagttattccttgtagaacgcagatc 8118
Query: 600 agtaagctttcatcaccaatatgaggatgactgtwtctccgcgcagaacgatgttggtca 659
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 8119 agtaagctttcatcaccaatatgaggatgactgtatctccgcgcagaacgatgttggtca 8178
Query: 660 attcctacttgtggcagactttaaccgcacatgacawctgtwattgtccgttaaacatat 719
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 8179 attcctacttgtggcagactttaaccgcacatgacatctgtaattgtccgttaaacatat 8238
Query: 720 tcaaatactgcatggtcagctcaataaatatctactgatctttagatgaagactagggtt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8239 tcaaatactgcatggtcagctcaataaatatctactgatctttagatgaagactagggtt 8298
Query: 780 gcgcttcttcctgacattatagttacaccttgtactacggcactagtaactcattgtatt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8299 gcgcttcttcctgacattatagttacaccttgtactacggcactagtaactcattgtatt 8358
Query: 840 ccagttttattatgatccttctccg 864
|||||||||||||||||||||||||
Sbjct: 8359 ccagttttattatgatccttctccg 8383
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5854
Number of Sequences: 1807
Number of extensions: 5854
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 864
length of database: 10,358,551
effective HSP length: 16
effective length of query: 848
effective length of database: 10,329,639
effective search space: 8759533872
effective search space used: 8759533872
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)